STRINGSTRING
Slin_3304 protein (Spirosoma linguale) - STRING interaction network
"Slin_3304" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3304Hypothetical protein (496 aa)    
Predicted Functional Partners:
Slin_3305
Hypothetical protein (1144 aa)
 
          0.971
Slin_3307
Hypothetical protein (190 aa)
 
          0.790
Slin_3302
Hypothetical protein (502 aa)
              0.615
Slin_1524
GtrA family protein (125 aa)
   
          0.600
Slin_3306
Hypothetical protein (459 aa)
              0.590
Slin_4115
Hypothetical protein (2278 aa)
   
          0.583
Slin_3303
Hypothetical protein (147 aa)
              0.569
Slin_6450
RagB/SusD domain-containing protein (493 aa)
   
          0.487
Slin_4321
Histidine kinase (1355 aa)
   
          0.459
Slin_5393
Hypothetical protein (1303 aa)
   
          0.443
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (6%) [HD]