STRINGSTRING
Slin_3334 protein (Spirosoma linguale) - STRING interaction network
"Slin_3334" - Beta-lactamase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3334Beta-lactamase (349 aa)    
Predicted Functional Partners:
Slin_0038
Peptidase S45 penicillin amidase (807 aa)
         
    0.900
Slin_3212
Beta-lactamase (304 aa)
   
   
 
0.857
Slin_5194
Beta-lactamase (323 aa)
   
   
 
0.855
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (491 aa)
       
      0.567
Slin_2889
Hypothetical protein (137 aa)
       
      0.567
Slin_3333
Cystathionine gamma-synthase (393 aa)
              0.564
Slin_6349
Muconate lactonizing mandelate racemase protein (340 aa)
 
     
  0.492
Slin_1934
Muconate lactonizing mandelate racemase protein (355 aa)
 
     
  0.489
Slin_1377
Hypothetical protein (160 aa)
       
      0.454
Slin_0543
DNA polymerase I (1024 aa)
         
  0.439
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (9%) [HD]