STRINGSTRING
Slin_3363 protein (Spirosoma linguale) - STRING interaction network
"Slin_3363" - Cupin in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3363Cupin (181 aa)    
Predicted Functional Partners:
Slin_3501
Cupin (184 aa)
   
          0.590
Slin_5906
Hypothetical protein (135 aa)
   
          0.577
Slin_2514
Hypothetical protein (142 aa)
   
          0.466
Slin_0395
NIPSNAP family containing protein (262 aa)
   
          0.441
Slin_1131
NAD-dependent epimerase/dehydratase (315 aa)
   
          0.420
Slin_5108
Hypothetical protein (387 aa)
   
          0.418
Slin_6557
Hypothetical protein (89 aa)
   
          0.406
Slin_3362
Proline-specific peptidase; Releases the N-terminal proline from various substrates (346 aa)
              0.400
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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