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Slin_3372 protein (Spirosoma linguale) - STRING interaction network
"Slin_3372" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3372Hypothetical protein (455 aa)    
Predicted Functional Partners:
Slin_5033
Hypothetical protein (168 aa)
   
          0.670
Slin_3636
Major facilitator superfamily protein (411 aa)
   
          0.653
Slin_3632
Major facilitator superfamily protein (422 aa)
   
          0.644
Slin_3371
Hypothetical protein (267 aa)
              0.625
Slin_3633
Major facilitator superfamily protein (415 aa)
   
          0.622
Slin_2840
Major facilitator superfamily protein (415 aa)
   
          0.607
Slin_1613
Lipoprotein (345 aa)
   
          0.601
Slin_6149
Peptidase S41 (513 aa)
   
          0.577
Slin_2382
Hypothetical protein (498 aa)
   
          0.545
Slin_6543
Hypothetical protein (114 aa)
   
          0.538
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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