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Slin_3374 protein (Spirosoma linguale) - STRING interaction network
"Slin_3374" - Peptidase U61 LD-carboxypeptidase A in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3374Peptidase U61 LD-carboxypeptidase A (341 aa)    
Predicted Functional Partners:
Slin_3373
DinB family protein (181 aa)
              0.613
Slin_4196
Glycoside hydrolase (1002 aa)
 
     
  0.515
Slin_5526
Mur ligase middle domain-containing protein (453 aa)
         
  0.464
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation (461 aa)
         
  0.464
Slin_4460
Nucleoside recognition protein domain-containing protein (411 aa)
              0.461
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (510 aa)
         
  0.441
Slin_5392
beta-N-acetylhexosaminidase (953 aa)
         
  0.438
Slin_2717
D-alanyl-D-alaninecarboxypeptidase/ D-alanyl-D-alanine-endopeptidase (514 aa)
 
        0.416
Slin_5742
Cytosine deaminase (144 aa)
   
        0.411
tadA
CMP/dCMP deaminase zinc-binding protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) (144 aa)
   
        0.411
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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