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Slin_3383 protein (Spirosoma linguale) - STRING interaction network
"Slin_3383" - Cold-shock DNA-binding domain-containing protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3383Cold-shock DNA-binding domain-containing protein (198 aa)    
Predicted Functional Partners:
Slin_5691
DEAD/DEAH box helicase (475 aa)
   
  0.970
Slin_3331
DEAD/DEAH box helicase (441 aa)
   
  0.970
Slin_3330
DEAD/DEAH box helicase (447 aa)
   
  0.970
Slin_3329
DEAD/DEAH box helicase (380 aa)
   
  0.970
Slin_2449
DEAD/DEAH box helicase (485 aa)
   
  0.970
Slin_1766
DEAD/DEAH box helicase (535 aa)
   
  0.970
Slin_0250
DEAD/DEAH box helicase (643 aa)
   
  0.970
Slin_5486
Cyclophilin type peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (196 aa)
     
  0.945
Slin_5201
Cyclophilin type peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (145 aa)
     
  0.945
Slin_4816
Cyclophilin type peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (240 aa)
     
  0.945
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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