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Slin_3385 protein (Spirosoma linguale) - STRING interaction network
"Slin_3385" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3385Hypothetical protein (267 aa)    
Predicted Functional Partners:
Slin_4976
Endonuclease/exonuclease/phosphatase (266 aa)
 
          0.771
Slin_6338
Dehydrogenase (957 aa)
   
          0.689
Slin_4778
G-D-S-L family lipolytic protein (417 aa)
   
          0.678
Slin_0511
Dehydrogenase (1265 aa)
   
          0.676
Slin_4779
Dehydrogenase (1162 aa)
   
          0.645
Slin_3386
Gluconate transporter (438 aa)
              0.611
Slin_5487
Dehydrogenase (1023 aa)
   
          0.588
Slin_1264
Xylose isomerase (274 aa)
   
          0.577
Slin_5789
Xylose isomerase (285 aa)
   
          0.570
Slin_1262
Dehydrogenase (1068 aa)
   
          0.566
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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