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Slin_3386 protein (Spirosoma linguale) - STRING interaction network
"Slin_3386" - Gluconate transporter in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3386Gluconate transporter (438 aa)    
Predicted Functional Partners:
Slin_0411
Carbohydrate kinase (495 aa)
 
     
  0.629
Slin_3385
Hypothetical protein (267 aa)
              0.611
Slin_1232
Endoribonuclease L-PSP (158 aa)
 
          0.529
Slin_1926
Glycerate kinase (371 aa)
 
   
  0.494
Slin_4083
6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH (484 aa)
         
  0.466
Slin_4247
Carbohydrate kinase (492 aa)
         
  0.457
Slin_1805
Sugar (pentulose and hexulose) kinase-like protein (474 aa)
         
  0.457
ilvD
Dihydroxy-acid dehydratase (569 aa)
   
   
  0.432
Slin_1829
Dihydroxy-acid dehydratase (568 aa)
   
   
  0.432
Slin_3955
2-dehydro-3-deoxyphosphogluconate aldolase (215 aa)
   
   
  0.422
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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