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Slin_3394 protein (Spirosoma linguale) - STRING interaction network
"Slin_3394" - PAS/PAC sensor signal transduction histidine kinase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3394PAS/PAC sensor signal transduction histidine kinase (728 aa)    
Predicted Functional Partners:
Slin_5387
Transcriptional regulator (236 aa)
 
 
  0.913
Slin_5611
Transcriptional regulator (235 aa)
 
 
  0.874
Slin_2666
AraC family transcriptional regulator (251 aa)
 
  0.863
Slin_1037
Response regulator receiver protein (247 aa)
 
  0.856
Slin_1028
Response regulator receiver protein (141 aa)
 
  0.850
Slin_3850
Response regulator receiver protein (158 aa)
 
 
  0.839
Slin_0919
Transcriptional regulator (223 aa)
 
 
  0.829
Slin_2490
Transcriptional regulator (244 aa)
 
 
  0.823
Slin_2944
Transcriptional regulator (223 aa)
 
 
  0.822
Slin_1849
Transcriptional regulator (228 aa)
 
 
  0.814
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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