STRINGSTRING
Slin_3398 protein (Spirosoma linguale) - STRING interaction network
"Slin_3398" - Metallophosphoesterase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3398Metallophosphoesterase (304 aa)    
Predicted Functional Partners:
Slin_3397
Metal dependent phosphohydrolase (182 aa)
 
          0.659
Slin_3399
Hypothetical protein (531 aa)
 
          0.650
Slin_1976
Conjugative relaxase domain-containing protein (919 aa)
   
        0.574
Slin_6227
Hypothetical protein (420 aa)
   
          0.519
Slin_3400
TonB-dependent receptor plug (1057 aa)
 
          0.498
Slin_6192
Demethylmenaquinone methyltransferase-like protein (314 aa)
   
          0.438
Slin_3035
Hypothetical protein (533 aa)
   
          0.434
Slin_3396
Phosphoesterase (928 aa)
              0.431
Slin_6554
Hypothetical protein (166 aa)
   
          0.429
Slin_4871
Hypothetical protein (151 aa)
   
          0.414
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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