STRINGSTRING
Slin_3412 protein (Spirosoma linguale) - STRING interaction network
"Slin_3412" - Eco57I restriction endonuclease in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3412Eco57I restriction endonuclease (1159 aa)    
Predicted Functional Partners:
Slin_3414
Helicase (1127 aa)
 
          0.944
Slin_3413
Hypothetical protein (361 aa)
              0.821
Slin_3415
Oxidoreductase domain-containing protein (499 aa)
              0.497
Slin_2397
Hypothetical protein (571 aa)
   
          0.495
Slin_3410
Resolvase (206 aa)
 
     
  0.492
Slin_4856
ATPase AAA (294 aa)
   
          0.487
Slin_4171
Restriction endonuclease (257 aa)
 
          0.468
Slin_4800
Hypothetical protein (498 aa)
   
          0.455
Slin_3409
Hypothetical protein (368 aa)
 
        0.435
Slin_0628
RNA-directed DNA polymerase (461 aa)
 
          0.434
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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