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Slin_3436 protein (Spirosoma linguale) - STRING interaction network
"Slin_3436" - Oxidoreductase domain-containing protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3436Oxidoreductase domain-containing protein (378 aa)    
Predicted Functional Partners:
Slin_3432
Xylose isomerase (350 aa)
 
   
  0.954
Slin_0439
Xylose isomerase (308 aa)
 
   
  0.867
Slin_1892
Xylose isomerase (296 aa)
 
   
  0.761
Slin_0527
Xylose isomerase (289 aa)
 
   
  0.760
Slin_1842
Xylose isomerase (287 aa)
 
   
  0.743
Slin_3435
Oxidoreductase domain-containing protein (381 aa)
 
       
0.743
Slin_3337
Xylose isomerase (287 aa)
 
   
  0.730
Slin_0334
Xylose isomerase (318 aa)
 
   
  0.728
Slin_2652
Xylose isomerase (283 aa)
 
   
  0.724
Slin_3491
Xylose isomerase (281 aa)
 
   
  0.723
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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