STRINGSTRING
Slin_3451 protein (Spirosoma linguale) - STRING interaction network
"Slin_3451" - ADP-L-glycero-D-manno-heptose-6-epimerase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3451ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose (321 aa)    
Predicted Functional Partners:
Slin_2827
Glycosyl transferase family protein (332 aa)
 
   
  0.917
Slin_3479
Glycosyl transferase family protein (342 aa)
 
   
  0.915
Slin_6505
PfkB domain-containing protein (333 aa)
 
 
  0.879
Slin_3466
rfaE bifunctional protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose (159 aa)
 
 
  0.873
Slin_6413
Glycosyl transferase family protein (329 aa)
 
   
  0.863
Slin_6307
Capsular exopolysaccharide family protein (772 aa)
   
 
  0.706
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate (190 aa)
 
   
  0.702
Slin_2822
Glycosyl transferase family protein (357 aa)
 
   
  0.679
Slin_5206
Glycosyl transferase family protein (401 aa)
 
   
  0.662
Slin_4070
Oxidoreductase domain-containing protein (734 aa)
   
   
  0.655
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (9%) [HD]