STRINGSTRING
Slin_3456 protein (Spirosoma linguale) - STRING interaction network
"Slin_3456" - Peptidase S8/S53 subtilisin kexin sedolisin in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3456Peptidase S8/S53 subtilisin kexin sedolisin (515 aa)    
Predicted Functional Partners:
Slin_4538
Hypothetical protein (225 aa)
   
  0.736
Slin_1833
Hypothetical protein (476 aa)
   
  0.736
Slin_0458
Ankyrin (161 aa)
     
    0.717
Slin_5122
Hypothetical protein (1005 aa)
   
          0.701
Slin_0807
PpiC-type peptidyl-prolyl cis-trans isomerase (797 aa)
 
 
 
  0.678
Slin_3457
Peptidase M24 (430 aa)
         
  0.640
Slin_3587
Hypothetical protein (1087 aa)
   
          0.629
Slin_3455
Hypothetical protein (270 aa)
              0.596
Slin_5110
Hypothetical protein (311 aa)
   
          0.578
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate (337 aa)
     
      0.557
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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