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Slin_3457 protein (Spirosoma linguale) - STRING interaction network
"Slin_3457" - Peptidase M24 in Spirosoma linguale
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3457Peptidase M24 (430 aa)    
Predicted Functional Partners:
Slin_0543
DNA polymerase I (1024 aa)
   
   
  0.685
Slin_3456
Peptidase S8/S53 subtilisin kexin sedolisin (515 aa)
         
  0.640
Slin_5247
Translation elongation factor P (187 aa)
 
 
  0.593
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (682 aa)
   
 
  0.560
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (890 aa)
 
   
  0.552
Slin_2594
Transketolase (681 aa)
   
   
  0.485
aroQ
3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate (142 aa)
            0.484
Slin_5766
Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed (270 aa)
   
   
  0.478
Slin_5824
Peptidase M1 membrane alanine aminopeptidase (551 aa)
 
 
  0.473
Slin_4038
Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed (253 aa)
   
   
  0.473
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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