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Slin_3465 protein (Spirosoma linguale) - STRING interaction network
"Slin_3465" - Hypothetical protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3465Hypothetical protein (350 aa)    
Predicted Functional Partners:
Slin_3466
rfaE bifunctional protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose (159 aa)
              0.857
Slin_1309
Hypothetical protein (614 aa)
   
          0.773
Slin_1664
GH3 auxin-responsive promoter (514 aa)
   
          0.756
Slin_2040
Sporulation domain-containing protein (380 aa)
   
          0.738
Slin_5551
Peptidase M28 (343 aa)
   
          0.724
Slin_5651
GH3 auxin-responsive promoter (507 aa)
   
          0.714
Slin_4064
Hypothetical protein (180 aa)
   
          0.708
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine (117 aa)
              0.692
Slin_6328
Hypothetical protein (150 aa)
   
          0.683
Slin_4195
Hypothetical protein (226 aa)
   
          0.671
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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