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Slin_3470 protein (Spirosoma linguale) - STRING interaction network
"Slin_3470" - Amino acid permease-associated protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3470Amino acid permease-associated protein (561 aa)    
Predicted Functional Partners:
Slin_4791
Trehalose synthase (1114 aa)
   
  0.947
Slin_3625
Alpha amylase (571 aa)
   
  0.947
Slin_3114
Alpha amylase (579 aa)
   
  0.947
glgE
Alpha amylase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB (681 aa)
   
  0.947
Slin_2883
Alpha amylase (630 aa)
   
  0.947
Slin_0347
Alpha amylase (522 aa)
   
  0.947
Slin_4514
Aspartate kinase (818 aa)
   
 
  0.906
Slin_5065
Amino acid permease-associated protein (457 aa)
 
          0.780
Slin_3471
Gliding motility-associated ABC transporter ATP-binding subunit GldA (305 aa)
     
 
  0.651
Slin_1379
Ethanolamine transporter (445 aa)
 
          0.621
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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