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Slin_3472 protein (Spirosoma linguale) - STRING interaction network
"Slin_3472" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3472Hypothetical protein (177 aa)    
Predicted Functional Partners:
Slin_0498
Lipoprotein (187 aa)
   
          0.764
Slin_6323
Lipoprotein (189 aa)
   
          0.684
Slin_6152
Hypothetical protein (418 aa)
   
          0.620
Slin_4663
PA-phosphatase-like phosphoesterase (515 aa)
   
          0.586
Slin_3952
Hypothetical protein (327 aa)
   
          0.567
aroB
3-dehydroquinate synthase (345 aa)
              0.560
Slin_6525
Hypothetical protein (189 aa)
   
          0.557
Slin_6608
Transcriptional regulator (753 aa)
   
          0.554
Slin_3381
Amidohydrolase (455 aa)
   
          0.544
Slin_3019
Hypothetical protein (197 aa)
   
          0.536
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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