STRINGSTRING
Slin_3481 protein (Spirosoma linguale) - STRING interaction network
"Slin_3481" - MazG nucleotide pyrophosphohydrolase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3481MazG nucleotide pyrophosphohydrolase (108 aa)    
Predicted Functional Partners:
Slin_3480
Peptidase M16 domain-containing protein (411 aa)
 
          0.869
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism (306 aa)
     
 
  0.813
Slin_3479
Glycosyl transferase family protein (342 aa)
              0.653
Slin_3227
Uroporphyrinogen III synthase HEM4 (261 aa)
   
          0.636
ctc
Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance (188 aa)
 
          0.576
Slin_4064
Hypothetical protein (180 aa)
 
          0.564
Slin_5965
PSP1 domain-containing protein (398 aa)
 
          0.540
Slin_6328
Hypothetical protein (150 aa)
   
          0.527
Slin_0661
LmbE family protein (239 aa)
 
     
  0.495
Slin_6518
Hypothetical protein (309 aa)
   
          0.487
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (6%) [HD]