STRINGSTRING
Slin_3491 protein (Spirosoma linguale) - STRING interaction network
"Slin_3491" - Xylose isomerase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3491Xylose isomerase (281 aa)    
Predicted Functional Partners:
Slin_0970
Oxidoreductase domain-containing protein (385 aa)
 
   
  0.783
Slin_3435
Oxidoreductase domain-containing protein (381 aa)
 
   
  0.779
Slin_0049
Oxidoreductase domain-containing protein (391 aa)
 
   
  0.734
Slin_5623
Oxidoreductase domain-containing protein (458 aa)
 
   
  0.731
Slin_1698
Oxidoreductase domain-containing protein (374 aa)
 
   
  0.726
Slin_3436
Oxidoreductase domain-containing protein (378 aa)
 
   
  0.723
Slin_1925
Oxidoreductase domain-containing protein (340 aa)
 
   
  0.713
Slin_4070
Oxidoreductase domain-containing protein (734 aa)
   
   
  0.702
Slin_1843
Oxidoreductase domain-containing protein (447 aa)
 
   
  0.686
Slin_4732
Oxidoreductase domain-containing protein (427 aa)
 
   
  0.684
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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