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Slin_3510 protein (Spirosoma linguale) - STRING interaction network
"Slin_3510" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3510Hypothetical protein (116 aa)    
Predicted Functional Partners:
Slin_5021
Adenylate/guanylate cyclase (348 aa)
   
          0.572
Slin_3511
Hypothetical protein (113 aa)
              0.561
Slin_4644
Hypothetical protein (350 aa)
   
          0.559
Slin_0971
Hypothetical protein (932 aa)
   
          0.523
Slin_1883
KaiB domain-containing protein (97 aa)
   
          0.515
Slin_3267
Peptidase S9 prolyl oligopeptidase active site domain-containing protein (709 aa)
   
          0.500
Slin_3990
Peptidase M14 carboxypeptidase A (942 aa)
   
          0.498
Slin_1884
Circadian clock protein KaiC (569 aa)
   
          0.495
Slin_1882
KaiB domain-containing protein (106 aa)
   
          0.462
Slin_2785
4-amino-4-deoxy-L-arabinose transferase-like protein (502 aa)
   
          0.457
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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