STRINGSTRING
Slin_3517 protein (Spirosoma linguale) - STRING interaction network
"Slin_3517" - Beta-lactamase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3517Beta-lactamase (447 aa)    
Predicted Functional Partners:
Slin_3516
Hypothetical protein (431 aa)
              0.671
Slin_0459
Hypothetical protein (390 aa)
          0.611
Slin_0923
Hypothetical protein (418 aa)
            0.562
Slin_3515
Hypothetical protein (124 aa)
              0.560
Slin_3514
Hypothetical protein (265 aa)
              0.560
Slin_3512
Beta-lactamase (364 aa)
 
       
0.505
Slin_5392
beta-N-acetylhexosaminidase (953 aa)
 
     
0.484
Slin_4196
Glycoside hydrolase (1002 aa)
 
     
0.481
Slin_2266
Alanine racemase (835 aa)
         
  0.460
Slin_0543
DNA polymerase I (1024 aa)
         
  0.444
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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