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Slin_3536 protein (Spirosoma linguale) - STRING interaction network
"Slin_3536" - Carbamoyl-phosphate synthase L chain ATP-binding protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3536Carbamoyl-phosphate synthase L chain ATP-binding protein (517 aa)    
Predicted Functional Partners:
Slin_1632
Carboxyl transferase (522 aa)
  0.998
Slin_4899
methylcrotonoyl-CoA carboxylase (536 aa)
 
  0.997
Slin_3003
biotin--acetyl-CoA-carboxylase ligase (269 aa)
 
 
  0.982
Slin_2390
Biotin/lipoyl attachment domain-containing protein (168 aa)
   
  0.965
Slin_4454
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second (1149 aa)
 
   
0.943
pyrB
Aspartate carbamoyltransferase (307 aa)
         
    0.900
Slin_2256
methylmalonyl-CoA mutase (1110 aa)
   
   
  0.865
Slin_6640
methylmalonyl-CoA mutase large subunit (724 aa)
   
   
  0.860
Slin_5246
acetyl-CoA carboxylase, biotin carboxyl carrier protein (159 aa)
 
   
  0.822
Slin_4914
Transketolase (801 aa)
   
   
  0.728
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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