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Slin_3556 protein (Spirosoma linguale) - STRING interaction network
"Slin_3556" - ATPase P in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3556ATPase P (836 aa)    
Predicted Functional Partners:
Slin_5458
MgtC/SapB transporter (212 aa)
 
 
  0.980
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Cell wall formation (222 aa)
     
      0.840
Slin_2925
ATPase P (767 aa)
 
 
0.749
Slin_3569
ATPase P (804 aa)
 
 
0.725
Slin_5596
ABC transporter (232 aa)
 
  0.654
Slin_3557
Hypothetical protein (232 aa)
 
          0.645
Slin_5540
ABC transporter (601 aa)
   
  0.641
Slin_2202
ABC transporter (301 aa)
 
  0.638
Slin_2319
Glutamate synthase (1524 aa)
   
   
  0.628
Slin_6496
ABC transporter (208 aa)
 
  0.623
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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