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Slin_3570 protein (Spirosoma linguale) - STRING interaction network
"Slin_3570" - UspA domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3570UspA domain-containing protein (271 aa)    
Predicted Functional Partners:
Slin_3543
UspA domain-containing protein (293 aa)
   
          0.626
Slin_3571
Oxygen-independent coproporphyrinogen III oxidase (460 aa)
 
        0.615
Slin_3569
ATPase P (804 aa)
     
 
  0.611
groL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (545 aa)
     
 
  0.569
Slin_0435
Orotidine 5’-phosphate decarboxylase (279 aa)
   
     
  0.557
Slin_0547
UspA domain-containing protein (253 aa)
   
          0.524
Slin_3572
Hypothetical protein (175 aa)
              0.505
Slin_3556
ATPase P (836 aa)
   
   
  0.452
pgk
Phosphoglycerate kinase (395 aa)
   
   
  0.423
Slin_4168
Glyceraldehyde-3-phosphate dehydrogenase (333 aa)
         
  0.417
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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