STRINGSTRING
Slin_3571 protein (Spirosoma linguale) - STRING interaction network
"Slin_3571" - Oxygen-independent coproporphyrinogen III oxidase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3571Oxygen-independent coproporphyrinogen III oxidase (460 aa)    
Predicted Functional Partners:
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (339 aa)
 
 
  0.971
Slin_6103
Protoporphyrinogen oxidase (454 aa)
   
 
  0.945
Slin_3562
Cytochrome C oxidase cbb3-type subunit I (736 aa)
 
     
  0.888
Slin_2294
Coproporphyrinogen oxidase (304 aa)
   
 
  0.877
Slin_2843
Oxygen-independent coproporphyrinogen III oxidase (374 aa)
   
 
0.863
Slin_3559
Cytochrome C oxidase accessory protein CcoG (497 aa)
 
     
  0.854
Slin_3572
Hypothetical protein (175 aa)
   
        0.821
Slin_3560
Cytochrome C class I (271 aa)
 
     
  0.801
Slin_3569
ATPase P (804 aa)
 
   
  0.800
Slin_3557
Hypothetical protein (232 aa)
 
          0.776
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (13%) [HD]