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Slin_3584 protein (Spirosoma linguale) - STRING interaction network
"Slin_3584" - OmpA/MotB domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3584OmpA/MotB domain-containing protein (798 aa)    
Predicted Functional Partners:
Slin_3585
Hypothetical protein (324 aa)
 
          0.910
Slin_3583
Hypothetical protein (313 aa)
 
          0.862
Slin_2568
Ligand-binding protein (812 aa)
   
    0.784
Slin_3226
Hypothetical protein (324 aa)
 
          0.780
Slin_4937
Polysaccharide export protein (800 aa)
   
    0.778
Slin_4946
Hypothetical protein (711 aa)
 
          0.769
Slin_3586
Hypothetical protein (3324 aa)
 
          0.753
Slin_4097
OmpA/MotB domain-containing protein (285 aa)
   
          0.751
Slin_1912
Periplasmic component of the Tol biopolymer transport system-like protein (512 aa)
   
 
  0.746
Slin_3219
Hypothetical protein (749 aa)
 
          0.730
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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