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Slin_3586 protein (Spirosoma linguale) - STRING interaction network
"Slin_3586" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3586Hypothetical protein (3324 aa)    
Predicted Functional Partners:
Slin_3585
Hypothetical protein (324 aa)
 
          0.939
Slin_3584
OmpA/MotB domain-containing protein (798 aa)
 
          0.753
Slin_4061
Hypothetical protein (1351 aa)
   
          0.707
Slin_1311
OmpA/MotB domain-containing protein (757 aa)
   
          0.561
Slin_4309
Hypothetical protein (416 aa)
   
          0.558
Slin_4945
OmpA/MotB domain-containing protein (813 aa)
   
          0.552
Slin_5627
Anthranilate phosphoribosyltransferase-like protein (419 aa)
   
          0.512
Slin_1271
Crp/Fnr family transcriptional regulator (350 aa)
   
          0.508
Slin_4564
Hypothetical protein (171 aa)
   
          0.503
Slin_3553
Crp/Fnr family transcriptional regulator (348 aa)
   
          0.494
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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