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Slin_3590 protein (Spirosoma linguale) - STRING interaction network
"Slin_3590" - N-acetyltransferase GCN5 in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3590N-acetyltransferase GCN5 (185 aa)    
Predicted Functional Partners:
Slin_3591
TonB-dependent receptor plug (730 aa)
              0.580
rpsD
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (201 aa)
   
      0.565
cmk
Cytidylate kinase (233 aa)
              0.549
Slin_3592
Hypothetical protein (216 aa)
              0.440
Slin_2319
Glutamate synthase (1524 aa)
           
  0.434
Slin_4269
Pseudaminic acid synthase (351 aa)
   
   
  0.423
Slin_3595
Translation initiation factor SUI1 (112 aa)
   
      0.420
Slin_4262
UDP-N-acetylglucosamine 4,6-dehydratase (338 aa)
         
  0.406
Slin_4182
UTP-glucose-1-phosphate uridylyltransferase (287 aa)
   
        0.400
Slin_2596
Nucleotidyl transferase (319 aa)
   
        0.400
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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