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Slin_3592 protein (Spirosoma linguale) - STRING interaction network
"Slin_3592" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3592Hypothetical protein (216 aa)    
Predicted Functional Partners:
Slin_3591
TonB-dependent receptor plug (730 aa)
 
     
  0.940
Slin_3593
Signal transduction histidine kinase LytS (491 aa)
              0.725
Slin_3594
LytTR family transcriptional regulator (260 aa)
              0.694
Slin_2852
Hypothetical protein (759 aa)
   
          0.662
Slin_4291
Fibronectin type III domain-containing protein (2603 aa)
   
          0.653
Slin_3582
Hypothetical protein (360 aa)
   
          0.624
Slin_4386
Hypothetical protein (156 aa)
   
          0.598
Slin_3595
Translation initiation factor SUI1 (112 aa)
              0.583
Slin_3169
TonB-dependent receptor (813 aa)
   
          0.567
Slin_3035
Hypothetical protein (533 aa)
   
          0.549
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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