STRINGSTRING
Slin_3597 protein (Spirosoma linguale) - STRING interaction network
"Slin_3597" - Peptidase M23 in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3597Peptidase M23 (221 aa)    
Predicted Functional Partners:
Slin_1923
Hypothetical protein (218 aa)
   
          0.615
Slin_3598
Transcriptional regulator (166 aa)
              0.530
Slin_6521
Carboxyl-terminal protease (709 aa)
   
 
  0.480
Slin_5713
Peptidase S41; Degrades oligopeptides (1097 aa)
   
 
  0.480
Slin_4394
Carboxyl-terminal protease (575 aa)
   
 
  0.480
Slin_3923
Carboxyl-terminal protease (557 aa)
   
 
  0.480
Slin_2089
Peptidase S41 (341 aa)
   
 
  0.480
Slin_0786
Hypothetical protein (293 aa)
     
      0.466
Slin_1924
ABC transporter (441 aa)
   
          0.458
atpH
ATP synthase F1 subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (179 aa)
     
      0.455
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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