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Slin_3624 protein (Spirosoma linguale) - STRING interaction network
"Slin_3624" - Oxidoreductase molybdopterin binding protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3624Oxidoreductase molybdopterin binding protein (411 aa)    
Predicted Functional Partners:
Slin_3623
Hypothetical protein (135 aa)
 
   
  0.948
Slin_2734
Cytochrome C class I (200 aa)
 
 
 
  0.881
Slin_3625
Alpha amylase (571 aa)
              0.635
Slin_5930
NHL repeat containing protein (367 aa)
   
          0.548
Slin_4244
Oxidoreductase molybdopterin binding protein (266 aa)
   
     
  0.540
Slin_3622
Alkanesulfonate monooxygenase (390 aa)
              0.505
Slin_0961
Hypothetical protein (729 aa)
   
          0.487
Slin_2319
Glutamate synthase (1524 aa)
   
   
  0.483
Slin_1046
Hypothetical protein (1066 aa)
   
          0.477
Slin_0959
Hypothetical protein (776 aa)
   
          0.476
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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