STRINGSTRING
Slin_2177 protein (Spirosoma linguale) - STRING interaction network
"Slin_2177" - Beta-lactamase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2177Beta-lactamase (543 aa)    
Predicted Functional Partners:
murQ
RpiR family transcriptional regulator; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate (270 aa)
 
     
  0.526
Slin_0459
Hypothetical protein (390 aa)
          0.500
Slin_0923
Hypothetical protein (418 aa)
          0.493
Slin_5392
beta-N-acetylhexosaminidase (953 aa)
 
     
0.471
Slin_4196
Glycoside hydrolase (1002 aa)
 
     
0.465
Slin_2266
Alanine racemase (835 aa)
         
  0.460
Slin_3687
Glucose/galactose transporter (413 aa)
              0.451
Slin_0543
DNA polymerase I (1024 aa)
         
  0.444
Slin_2687
Glycoside hydrolase (677 aa)
         
  0.440
Slin_1258
Glycoside hydrolase (779 aa)
         
  0.440
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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