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Slin_3709 protein (Spirosoma linguale) - STRING interaction network
"Slin_3709" - uroporphyrin-III C/tetrapyrrole methyltransferase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3709uroporphyrin-III C/tetrapyrrole methyltransferase (535 aa)    
Predicted Functional Partners:
Slin_0478
Siroheme synthase (188 aa)
         
    0.900
Slin_3708
Hypothetical protein (299 aa)
              0.731
Slin_3447
Phospholipid/glycerol acyltransferase (188 aa)
   
          0.708
Slin_6602
Heparan-alpha-glucosaminide N-acetyltransferase (381 aa)
   
          0.684
Slin_3707
Hypothetical protein (187 aa)
              0.570
Slin_3431
Hypothetical protein (67 aa)
   
          0.554
Slin_6497
Thiopurine S-methyltransferase (228 aa)
   
          0.550
Slin_0766
Peptidase S9 prolyl oligopeptidase active site domain-containing protein (1001 aa)
   
          0.530
Slin_3705
Hypothetical protein (218 aa)
              0.520
Slin_3706
GSCFA domain-containing protein (311 aa)
              0.514
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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