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Slin_3768 protein (Spirosoma linguale) - STRING interaction network
"Slin_3768" - AraC family transcriptional regulator in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3768AraC family transcriptional regulator (297 aa)    
Predicted Functional Partners:
Slin_3767
Siderophore-interacting protein-like protein (232 aa)
              0.859
Slin_6244
AraC family transcriptional regulator (304 aa)
   
          0.747
Slin_2199
AraC family transcriptional regulator (264 aa)
   
          0.643
Slin_4136
AraC family transcriptional regulator (278 aa)
   
          0.584
Slin_4870
LysR family transcriptional regulator (298 aa)
     
   
  0.429
Slin_4312
LysR family transcriptional regulator (307 aa)
     
   
  0.429
Slin_3872
Alpha/beta hydrolase (301 aa)
   
 
 
  0.426
gcvT
Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine (364 aa)
       
      0.420
Slin_2407
AraC family transcriptional regulator (399 aa)
   
          0.418
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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