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Slin_3827 protein (Spirosoma linguale) - STRING interaction network
"Slin_3827" - Hypothetical protein in Spirosoma linguale
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3827Hypothetical protein (292 aa)    
Predicted Functional Partners:
Slin_4568
PARP catalytic domain-containing protein (446 aa)
   
          0.665
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (510 aa)
   
   
  0.596
Slin_2087
DNA/RNA non-specific endonuclease (724 aa)
     
      0.580
Slin_5663
RNA binding S1 domain-containing protein (595 aa)
   
        0.565
Slin_3380
ATPase AAA (632 aa)
 
        0.547
tsaD
Glycoprotease family metalloendopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction (332 aa)
   
        0.540
Slin_3582
Hypothetical protein (360 aa)
   
          0.540
obg
GTP-binding protein Obg/CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control (334 aa)
   
        0.535
Slin_5890
Fmu (Sun) domain-containing protein (453 aa)
     
        0.535
pyrB
Aspartate carbamoyltransferase (307 aa)
   
        0.531
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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