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Slin_3831 protein (Spirosoma linguale) - STRING interaction network
"Slin_3831" - Ethyl tert-butyl ether degradation EthD in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3831Ethyl tert-butyl ether degradation EthD (113 aa)    
Predicted Functional Partners:
Slin_6227
Hypothetical protein (420 aa)
   
          0.752
Slin_3832
Hypothetical protein (162 aa)
              0.703
Slin_2345
Oxidoreductase molybdopterin binding protein (170 aa)
   
          0.699
Slin_6292
PA14 domain-containing protein (1314 aa)
   
          0.688
Slin_3830
Crp/Fnr family transcriptional regulator (201 aa)
              0.659
Slin_3859
Polysaccharide biosynthesis protein (461 aa)
   
          0.653
Slin_0838
Glyoxalase/bleomycin resistance protein/dioxygenase (128 aa)
   
          0.652
Slin_6200
Type I phosphodiesterase/nucleotide pyrophosphatase (413 aa)
   
          0.625
Slin_4018
NmrA family protein (299 aa)
   
          0.602
Slin_2755
Glyoxalase/bleomycin resistance protein/dioxygenase (134 aa)
   
          0.590
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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