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Slin_3835 protein (Spirosoma linguale) - STRING interaction network
"Slin_3835" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3835Hypothetical protein (137 aa)    
Predicted Functional Partners:
Slin_3836
Alcohol dehydrogenase zinc-binding domain-containing protein (325 aa)
 
          0.816
Slin_3255
ECF subfamily RNA polymerase sigma-24 subunit (183 aa)
   
          0.747
Slin_1208
ECF subfamily RNA polymerase sigma-24 subunit (195 aa)
   
          0.654
Slin_5609
PDZ/DHR/GLGF domain-containing protein (421 aa)
   
          0.642
Slin_4453
Hypothetical protein (409 aa)
   
          0.630
Slin_2964
ECF subfamily RNA polymerase sigma-24 subunit (195 aa)
   
          0.627
Slin_0301
Hypothetical protein (448 aa)
   
          0.620
Slin_5484
Alpha-2-macroglobulin (2173 aa)
   
          0.610
Slin_3752
Hypothetical protein (490 aa)
   
          0.603
Slin_3834
Crp/Fnr family transcriptional regulator (191 aa)
              0.598
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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