STRINGSTRING
Slin_3848 protein (Spirosoma linguale) - STRING interaction network
"Slin_3848" - Response regulator receiver protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3848Response regulator receiver protein (107 aa)    
Predicted Functional Partners:
Slin_5796
Hypothetical protein (521 aa)
   
          0.588
Slin_3038
Hypothetical protein (524 aa)
   
          0.579
Slin_5187
Peptidase M56 BlaR1 (750 aa)
   
          0.564
Slin_1913
Hypothetical protein (215 aa)
   
          0.548
Slin_2406
Acyltransferase 3 (395 aa)
   
          0.518
Slin_4733
Hypothetical protein (506 aa)
   
          0.508
Slin_2036
Hypothetical protein (404 aa)
   
          0.460
Slin_5726
Glycoside hydrolase (656 aa)
   
          0.458
Slin_3134
Cytochrome C, class I (129 aa)
   
          0.458
Slin_5068
Acyltransferase family protein (419 aa)
   
          0.456
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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