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Slin_3890 protein (Spirosoma linguale) - STRING interaction network
"Slin_3890" - Luciferase-like protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3890Luciferase-like protein (340 aa)    
Predicted Functional Partners:
Slin_0477
NADPH-dependent FMN reductase (181 aa)
 
 
  0.764
Slin_3891
Poly(3-hydroxybutyrate) depolymerase-like protein (298 aa)
              0.617
Slin_3889
Hypothetical protein (119 aa)
              0.616
Slin_3888
TetR family transcriptional regulator (206 aa)
              0.616
Slin_5718
Glyoxalase/bleomycin resistance protein/dioxygenase (161 aa)
   
          0.610
Slin_5510
Glyoxalase/bleomycin resistance protein/dioxygenase (312 aa)
   
          0.582
Slin_4324
Glyoxalase/bleomycin resistance protein/dioxygenase (309 aa)
   
          0.579
Slin_6559
Coenzyme F420-dependent NADP oxidoreductase (202 aa)
 
     
  0.557
Slin_3805
Coenzyme F420-dependent NADP oxidoreductase (203 aa)
 
     
  0.529
Slin_4250
Methionine synthase (1261 aa)
           
  0.422
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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