STRINGSTRING
Slin_3903 protein (Spirosoma linguale) - STRING interaction network
"Slin_3903" - Intradiol ring-cleavage dioxygenase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3903Intradiol ring-cleavage dioxygenase (327 aa)    
Predicted Functional Partners:
Slin_1535
3-oxoadipate enol-lactonase (373 aa)
 
   
  0.906
Slin_3904
Hypothetical protein (65 aa)
              0.815
Slin_1536
3-carboxy-cis,cis-muconate cycloisomerase (438 aa)
 
     
  0.802
Slin_1534
4-hydroxybenzoate 3-monooxygenase (405 aa)
 
     
  0.801
Slin_1537
Protocatechuate 3,4-dioxygenase subunit alpha (173 aa)
   
          0.778
Slin_1533
3-oxoacid CoA-transferase subunit B (447 aa)
   
   
  0.691
Slin_3902
Hypothetical protein (170 aa)
              0.571
Slin_3905
Endoribonuclease L-PSP (164 aa)
              0.552
Slin_3901
Proline-specific peptidase (369 aa)
              0.511
Slin_4021
Catechol 2,3-dioxygenase (319 aa)
 
     
  0.423
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (8%) [HD]