STRINGSTRING
Slin_3913 protein (Spirosoma linguale) - STRING interaction network
"Slin_3913" - Peptidase M20 in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3913Peptidase M20 (440 aa)    
Predicted Functional Partners:
Slin_3912
Hypothetical protein (222 aa)
              0.763
Slin_3250
Peptidase M20 (424 aa)
 
     
  0.699
Slin_4763
Amidohydrolase (568 aa)
 
 
 
  0.663
Slin_1868
Peptidase M20 (508 aa)
 
     
  0.597
Slin_1936
Beta-lactamase (848 aa)
   
          0.581
Slin_6046
D-aminoacylase domain-containing protein (530 aa)
   
          0.578
Slin_1570
Glycosyl hydrolase (1021 aa)
   
          0.530
Slin_3379
Hypothetical protein (906 aa)
   
          0.521
Slin_1572
Glycoside hydrolase family protein (1078 aa)
   
          0.510
Slin_1563
Glycoside hydrolase family protein (1082 aa)
   
          0.488
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (6%) [HD]