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Slin_3919 protein (Spirosoma linguale) - STRING interaction network
"Slin_3919" - Glycosidase PH1107-like protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3919Glycosidase PH1107-like protein (364 aa)    
Predicted Functional Partners:
Slin_3918
Amidase (519 aa)
   
        0.696
Slin_3920
Peptidase M61 domain-containing protein (528 aa)
              0.632
Slin_6570
Oxidoreductase domain-containing protein (448 aa)
   
          0.621
Slin_6191
Hypothetical protein (855 aa)
   
          0.612
Slin_1698
Oxidoreductase domain-containing protein (374 aa)
   
          0.609
Slin_0088
Xylose isomerase (341 aa)
   
          0.586
Slin_0438
Hypothetical protein (247 aa)
   
          0.576
Slin_1162
Group 1 glycosyl transferase (790 aa)
 
          0.551
Slin_6381
N-acylglucosamine 2-epimerase (427 aa)
 
     
  0.551
Slin_0271
N-acylglucosamine 2-epimerase; Catalyzes the reversible epimerization of cellobiose to 4-O-beta-D-glucopyranosyl-D-mannose (Glc-Man) (402 aa)
 
     
  0.541
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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