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Slin_3922 protein (Spirosoma linguale) - STRING interaction network
"Slin_3922" - Hypothetical protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
Slin_3922Hypothetical protein; RNaseP catalyzes the removal of the 5’-leader sequence from pre-tRNA to produce the mature 5’-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5’-leader sequence and broadening the substrate specificity of the ribozyme (126 aa)    
Predicted Functional Partners:
Slin_3227
Uroporphyrinogen III synthase HEM4 (261 aa)
 
          0.839
Slin_1298
Hypothetical protein (434 aa)
   
          0.771
Slin_4064
Hypothetical protein (180 aa)
   
          0.760
Slin_2385
Hypothetical protein (901 aa)
   
          0.754
Slin_3923
Carboxyl-terminal protease (557 aa)
 
          0.753
rpmH
50S ribosomal protein L34 (55 aa)
         
  0.739
Slin_0989
Hypothetical protein (188 aa)
   
          0.732
Slin_2314
DoxX family protein (380 aa)
   
          0.701
Slin_2875
Hypothetical protein (843 aa)
   
          0.699
Slin_4915
Hypothetical protein (150 aa)
   
          0.696
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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