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Slin_3926 protein (Spirosoma linguale) - STRING interaction network
"Slin_3926" - LytTR family transcriptional regulator in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3926LytTR family transcriptional regulator (237 aa)    
Predicted Functional Partners:
Slin_3925
Signal transduction histidine kinase LytS (354 aa)
 
   
  0.975
Slin_3924
Hypothetical protein (367 aa)
              0.859
Slin_2134
Signal transduction histidine kinase LytS (387 aa)
 
 
  0.854
Slin_0331
Signal transduction histidine kinase LytS (355 aa)
 
 
  0.848
Slin_3174
Hypothetical protein (348 aa)
 
 
  0.847
Slin_4711
Signal transduction histidine kinase LytS (394 aa)
 
 
  0.844
Slin_5135
Signal transduction histidine kinase LytS (381 aa)
 
 
  0.843
Slin_0825
Signal transduction histidine kinase LytS (353 aa)
 
 
  0.842
Slin_1724
Signal transduction histidine kinase LytS (395 aa)
 
 
  0.841
Slin_0905
Signal transduction histidine kinase LytS (355 aa)
 
 
  0.841
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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