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Slin_3937 protein (Spirosoma linguale) - STRING interaction network
"Slin_3937" - Type 11 methyltransferase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3937Type 11 methyltransferase (298 aa)    
Predicted Functional Partners:
Slin_3936
ArsR family transcriptional regulator (109 aa)
              0.701
Slin_3939
Protein-tyrosine phosphatase, low molecular weight (141 aa)
         
  0.685
Slin_3940
Arsenic resistance protein (352 aa)
         
  0.684
Slin_3938
N-acetyltransferase GCN5 (150 aa)
              0.576
Slin_4564
Hypothetical protein (171 aa)
   
          0.446
Slin_4223
Hypothetical protein (542 aa)
   
          0.445
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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