STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3957PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: mlo:mlr6793 3-hydroxybutyryl-CoA dehydrogenase. (332 aa)    
Predicted Functional Partners:
Slin_1507
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mxa:MXAN_5841 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.992
Slin_2669
KEGG: acetoacetyl-CoA thiolase; K00626 acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.988
Slin_6110
KEGG: aci:ACIAD2988 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.987
Slin_0629
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: cti:RALTA_A3047 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.964
Slin_6109
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: pla:Plav_0465 3-hydroxyacyl-CoA dehydrogenase NAD-binding.
0.959
Slin_1533
3-oxoacid CoA-transferase, B subunit; KEGG: dar:Daro_1021 butyryl-CoA:acetate CoA transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; 3- oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; Belongs to the 3-oxoacid CoA-transferase family.
  
 
 0.946
Slin_4421
TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase; KEGG: rme:Rmet_2699 acetyl-CoA synthetase.
 
 
 0.934
Slin_0070
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: bav:BAV0216 3-hydroxybutyryl-CoA dehydrogenase.
  
  
 
0.926
Slin_1532
TIGRFAM: beta-ketoadipyl CoA thiolase; acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: ppw:PputW619_2629 beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.906
Slin_5109
TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: rpi:Rpic_0350 acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.905
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale DSM 74, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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