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Slin_3962 protein (Spirosoma linguale) - STRING interaction network
"Slin_3962" - Endoribonuclease L-PSP in Spirosoma linguale
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3962Endoribonuclease L-PSP (134 aa)    
Predicted Functional Partners:
fusA
Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (702 aa)
     
    0.947
Slin_0613
Endoribonuclease L-PSP (128 aa)
   
          0.776
Slin_5483
Endoribonuclease L-PSP (125 aa)
   
          0.774
Slin_3238
Endoribonuclease L-PSP (151 aa)
   
          0.774
Slin_3964
Pyridoxal phosphate-dependent enzyme (407 aa)
 
          0.698
Slin_3965
Amidohydrolase (414 aa)
 
          0.586
Slin_3963
Hypothetical protein (223 aa)
              0.574
Slin_3968
L-seryl-tRNA(ser) selenium transferase protein (406 aa)
 
          0.503
Slin_3969
Amidohydrolase (427 aa)
 
          0.496
Slin_3960
TonB-dependent receptor plug (1142 aa)
 
          0.494
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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