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Slin_3990 protein (Spirosoma linguale) - STRING interaction network
"Slin_3990" - Peptidase M14 carboxypeptidase A in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_3990Peptidase M14 carboxypeptidase A (942 aa)    
Predicted Functional Partners:
Slin_3992
Hypothetical protein (532 aa)
 
          0.759
Slin_4763
Amidohydrolase (568 aa)
 
          0.720
Slin_4320
Glycoside hydrolase family protein (330 aa)
   
          0.698
Slin_4581
Hypothetical protein (494 aa)
   
          0.637
Slin_1402
Hypothetical protein (247 aa)
 
          0.626
Slin_0095
Hypothetical protein (473 aa)
   
          0.622
Slin_4231
Lantibiotic dehydratase domain-containing protein (962 aa)
   
          0.614
Slin_3989
Cupin (106 aa)
              0.596
Slin_3997
Hypothetical protein (486 aa)
   
          0.588
Slin_3993
TonB-dependent receptor plug (1081 aa)
 
          0.588
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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