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Slin_4016 protein (Spirosoma linguale) - STRING interaction network
"Slin_4016" - Carboxylesterase type B in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_4016Carboxylesterase type B (551 aa)    
Predicted Functional Partners:
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP (199 aa)
     
    0.884
Slin_0458
Ankyrin (161 aa)
       
    0.708
Slin_4071
UDP-N-acetylglucosamine 2-epimerase (368 aa)
       
      0.582
Slin_0027
Esterase/lipase-like protein (509 aa)
 
   
  0.575
Slin_4017
AraC family transcriptional regulator (306 aa)
              0.514
Slin_4015
Hypothetical protein (87 aa)
              0.497
Slin_4014
PilT protein domain-containing protein (137 aa)
              0.497
Slin_4018
NmrA family protein (299 aa)
              0.489
Slin_6107
Von Willebrand factor A (359 aa)
     
      0.448
Slin_2667
Von Willebrand factor A (320 aa)
     
      0.448
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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